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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834824.1_cds_XP_016505736.1_19039
CDS Infomation

[gene=LOC107823565] [db_xref=GeneID:107823565] [protein=alpha-N-acetylglucosaminidase-like isoform X4] [protein_id=XP_016505736.1] [location=complement(join(14863..14872,14992..15030,15119..15363,16208..16318,16747..16845,17273..17375,21285..21394,21627..21674,21898..22039,23045..23075,23216..23322,24352..24433,26327..26421,27865..27950,29461..29582,29677..29888,31460..31536,31672..31896))] [gbkey=CDS]
Sequence

ATGGATTCCATTTCCATGATCTCCTCTTTAATTTTCATCTTATGCGCTTTCTGCTTTTCC
GGAGCTAATTCTTCGACGCTCGGAGTCAATTACGTTTCGCGGCTTCTCGAAATTCAGGAA
CGGGAAAGGGCACCTTCTTCGCTCCAATTAACTGCCGCCTACGGCGTTCTTAATCGCTTA
ATCCCTTCCCATTTTTCGACTTTTGAGTTTCACATCATTACCAAGGACCATTGTGATGGA
GAATTTTGTTTCAACATAAGCAATCACCCTGGTTCGGCTCGAGAAGGTTCTCCTGAAATT
TTAATAAGTGGAACCACAGCAGTAGAGATATTGTCAGGTCTTCATTGGTACTTGAAATAT
TGGTGTGGAGCACATATATCATGGATCAAAACAGGTGGAGCACAATTAGCTTCTGTACCT
TACCCTGGCTCTCTCCCTGCTGTTCAAGATGCAGGAATAGTAGTAAAGAGACCTGTTCCT
TGGAGCTATTACCAGAATGCTGTCACATCAAGCTATACATTTGCCTGGTGGGATTGGGTA
AGGTGGGAACAAGAGATTGACTGGATGGCTCTCCAGGGAATCAATTTGCCATTGGCATTC
ACTGGGCAAGAAGCTATATGGCAAAAGGTCTTCAAGAACTTCAATATTAGTACTTCAAAT
CTGGATGATTTCTTCGGAGGTCCAGCGTTTCTTGCATGGTCACGTATGGGAAACCTACAT
AGATGGGGCGGGCCACTGCCACAAAGTTGGCTAGATCAGCAACTCATTCTGCAGAAGAAA
ATTCTTGCCAGAATGTTTGAACTTGGGATGACGCCAGTTCTTCCAGCCTTTTCTGGAAAT
GTTCCGGCAGCACTGAAGCATGTATTTCCATCAGCAAAGATAAGTCGTCTGGGGAACTGG
TTTACTGTGAATAGTGATCCCAGATGGTGCTGCACATATCTTCTTGATGCAACTGATCCT
TTGTTTGTTGAAATCGGAAAAGCATTTATTGAACAACAGCTAAAAGAATATGGAAGGAGC
AGCCATATATATAACTGTTGGAAAATGTCAATCTATTGTAGTGATACCTTTGATGAGAAC
ACACCACCTGTTGATGATCCAGAGTATATCTCTTCCTTGGGGGCCACAATTTTTGAAGGA
ATGCAAAGTGCTGATTCTGATGCAGTTTGGCTAATGCAGGGATGGCTTTTCACATATGAT
CCTTTCTGGAGACCTCCACAGATGAAGGCACTTCTGCATTCTGTTCCTCTTGGCAAGTTG
ATCGTTCTTGATCTTTATGCTGAAGTTAAACCTATATGGGCTACTTCAAAGCAGTTCTAC
GGCACCCCATACATATGGTGTATGCTACACAATTTTGCTGGTAACGTTGAAATGTATGGA
GTTCTTGATGCAGTGGGATCAGGACCTGTTGAAGCTCGTATAAGTGACAACTCAACCATG
GTTGGTGTTGGTATGTCAATGGAAGGCATTGAACAGAACCCTGTTGTGTACGATTTTATG
GCTGAAATGGCTTTTCAGCATAACCCAGTTGATATCAAGGCTTGGATAAATCTATACTCC
AGAAGACGCTATGGGAGATTTGTTCAACCCATGCAAGATGCCTGGAATATTTTGTATCAT
ACCATCTATAATTGCACTGATGGTGCTTATGACAAAAATAGAGATGTTATTGTCTCATTT
CCAGATGTTGAGCCAAAGTCCATTTCAACACTGCAAATAGCACTAAATAATATCCATGAA
CAATATGGAAAACGATATTTAGGTAGAGCTATTCTGGAAGTAGCAAATGATTCCTATGAT
AAACCTCATCTTTGGTATTCAAACTCAGATGTTATACATGCACTAAAACTTTTCCTGGAG
AGTGGAAATCAACTATCTGACAGCAGTACCTACAGATATGACCTCATAGACCTGACAAGA
CAAGCTTTGGCAAAGATGCCATGA

Peptide Sequence

PEP ID

XP_016505736.1
PEP Infomation

PREDICTED: alpha-N-acetylglucosaminidase-like isoform X4 [Nicotiana tabacum]
Sequence

MDSISMISSLIFILCAFCFSGANSSTLGVNYVSRLLEIQERERAPSSLQLTAAYGVLNRL
IPSHFSTFEFHIITKDHCDGEFCFNISNHPGSAREGSPEILISGTTAVEILSGLHWYLKY
WCGAHISWIKTGGAQLASVPYPGSLPAVQDAGIVVKRPVPWSYYQNAVTSSYTFAWWDWV
RWEQEIDWMALQGINLPLAFTGQEAIWQKVFKNFNISTSNLDDFFGGPAFLAWSRMGNLH
RWGGPLPQSWLDQQLILQKKILARMFELGMTPVLPAFSGNVPAALKHVFPSAKISRLGNW
FTVNSDPRWCCTYLLDATDPLFVEIGKAFIEQQLKEYGRSSHIYNCWKMSIYCSDTFDEN
TPPVDDPEYISSLGATIFEGMQSADSDAVWLMQGWLFTYDPFWRPPQMKALLHSVPLGKL
IVLDLYAEVKPIWATSKQFYGTPYIWCMLHNFAGNVEMYGVLDAVGSGPVEARISDNSTM
VGVGMSMEGIEQNPVVYDFMAEMAFQHNPVDIKAWINLYSRRRYGRFVQPMQDAWNILYH
TIYNCTDGAYDKNRDVIVSFPDVEPKSISTLQIALNNIHEQYGKRYLGRAILEVANDSYD
KPHLWYSNSDVIHALKLFLESGNQLSDSSTYRYDLIDLTRQALAKMP

Transcript Sequence

Gene sequence data has not been registered.